- Møller, J. and Waagepetersen, R. (2003) Statistical inference and simulation for spatial point processes. Chapman and Hall/CRC Press.

List of corrections and comments.

- Biscio, C. A. N., Poinas, A. and Waagepetersen R. (2017) A note on gaps in proofs of central limit theorems, submitted.
- Deng, C., Waagepetersen, R.P., Wang, M. and Guan, Y. (2017) A fast spectral quasi-likelihood approach for spatial point processes,
*Statistics and Probability Letters*, accepted. - Waagepetersen, R. and Jalilian, A. (2017) Fast band width selection for estimation of the pair correlation function, submitted.
- Gang, X., Waagepetersen, R. and Guan, Y. (2017) Stochastic Quasi-likelihood for Case-Control Point Pattern Data, submitted.
- Deng, C., Guan, Y., Waagepetersen, R. and Zhang, J. (2017)
Second-order quasi-likelihood for spatial point
processes,
*Biometrics*, published online. - Hooghoudt, J., Barroso, M. and Waagepetersen, R. (2017) Towards
Bayesian inference of the spatial distribution of proteins from
three-cube Förster resonance energy transfer data,
*Annals of Applied Statistics*,**11**, 1711-1737. - Jalilian, A., Guan, Y. and Waagepetersen,
R. (2017) Orthogonal series estimation of
the pair correlation function of a spatial point
process,
*Statistica Sinica*, to appear. arXiv: 1796502. - Coeurjolly J.-F., Møller, J. and Waagepetersen, R. (2017) A
tutorial on Palm distributions for spatial point
processes,
*International Statistical Review*, published online. arXiv: 1512.05871. - Møller, J. and Waagepetersen, R. (2017) Some recent
developments in statistics for spatial point processes,
*Annual review of Statistics and its Applications*,**4**, 317-342. arXiv: 1609.00908. - Coeurjolly J.-F., Møller, J. and Waagepetersen, R. (2017)
Palm distributions for log Gaussian Cox processes,
*Scandinavian Journal of Statistics*,**44**, 192-203. - Couerjolly, J.-F., Guan, Y., Khanmohammadi, M. and Waagepetersen,
R. (2016) Towards optimal Takacs-Fiksel estimation,
*Spatial Statistics*,**18**, 396-411. arXiv: 1512.06693. - Waagepetersen, R., Guan, Y., Jalilian, A. and Mateu, J. (2016) Analysis of multi-species point patterns using multivariate log Gaussian Cox processes,
*Journal of the Royal Statistical Society*, Series C,**65**, 77-96. - Khanmohammadi, M., Waagepetersen, R. and Sporring, J. (2015) Analysis of shape and spatial interaction of synaptic vesicles using data from focused ion beam scanning electron microscopy (FIB-SEM),
*Frontiers in Neuroanatomy*,**9**, article 116, 11 pages. - Chang, X., Waagepetersen, R., Yu, H., Ma, X., Holford, T., Wang,
R. and Guan, Y. (2015) Disease risk estimation by combining
case-control data with aggregated information on the population at
risk,
*Biometrics*,**71**, 114-121. - Jalilian, A., Guan, Y., Mateu, J. and Waagepetersen, R. (2015) Multivariate product-shot-noise Cox models,
*Biometrics*,**71**, 1022-1033. - Deng, C., Waagepetersen, R. and Guan, Y. (2014) A combined estimating function approach for fitting stationary point process models,
*Biometrika*,**101**, 393-408. - Huang, H., Ma, X., Waagepetersen, R., Holford, T., Wang, R., Risch, H., Mueller, L. and Guan, Y. (2014) A new estimation approach for combining epidemiological data from multiple sources,
*Journal of the American Statistical Association*,**109**, 11-23. - Shen, G., He, F., Waagepetersen, R., Sun, I-F., Hao, Z., Chen, Z-S. and Yu, M. (2013) Quantifying effects of habitat heterogeneity and other clustering processes on spatial distributions of tree species,
*Ecology*,**94**, 2436-2443. - Baddeley, A.J., Coeurjolly, J.F., Rubak, E. and Waagepetersen R. (2014) A logistic regression estimating function for Gibbs point processes,
*Biometrika*,**101**, 377-392. - Guan, Y., Jalilian, A. and Waagepetersen, R. (2015) Quasi-likelihood for spatial point processes,
*Journal of the Royal Statistical Society, Series B*,**77**, 677-697. Supplementary material. - Jalilian, A., Guan, Y. and Waagepetersen, R. (2013) Decomposition of variance for spatial Cox processes,
*Scandinavian Journal of Statistics*,**40**, 119-137. - Waagepetersen, R. and Guan,
Y. (2009) Two-step estimation for
inhomogeneous spatial point processes (revised July 24, 2008)
and a simulation
study,
*Journal of the Royal Statistical Society, Series B*,**71**, 685-702. - Illian, J. B., Møller, J. and Waagepetersen, R. (2009) Hierarchic spatial point process analysis for a plant community with high biodiversity (revised 28.02.07),
*Environmental and Ecological Statistics*,**16**, 389-405. - Guan, Y., Waagepetersen, R. and Beale, C. (2008) Second-order analysis of inhomogeneous spatial point processes with proportional intensity functions,
*Journal of the American Statistical Association*,**103**, 769-777. - Waagepetersen, R. (2008) Estimating functions for inhomogeneous spatial point processes with incomplete covariate data (revised 28.05.2007),
*Biometrika*,**95**, 351-363. - Møller, J. and Waagepetersen, R. (2007) Modern statistics for spatial point processes,
*Scandinavian Journal of Statistics*,**34**, 643-684. - Waagepetersen, R. (2007) An estimating function approach to inference for inhomogeneous Neyman-Scott processes with Appendix (revised 21.03.06),
*Biometrics*,**63**, 252-258. - Waagepetersen, R. and Schweder, T. (2006) Likelihood-based analysis of clustered line transect data (revised 13/09/2005),
*Journal of Agricultural, Biological, and Environmental Statistics*,**11**, 264-279. - Waagepetersen, R. (2005) Discussion of "Residual analysis for spatial point processes",
*Journal of the Royal Statistical Society B*,**67**, 662. - Benes, V., Bodlak, K., Møller, J. and Waagepetersen, R. (2005) A case study on point process modelling in disease mapping,
*Image Analysis and Stereology*,**24**, 159-168. - Waagepetersen, R. (2004) Convergence of posteriors for discretized LGCPs,
*Statistics and Probability Letters*,**66**, 229-235. -
Baddeley, A. J., Møller, J. and Waagepetersen, R. (2000) Non-
and semi-parametric estimation of interaction in inhomogeneous point
patterns,
*Statistica Neerlandica*,**54**, 329-350. -
Møller, J., Syversveen, A.-R. and Waagepetersen, R. (1998) Log
Gaussian Cox processes,
*Scandinavian Journal of Statistics*,**25**, 451-482.

- Ibanez-Escriche, N., Sorensen, D. Waagepetersen, R. and Blasco, A. (2008) Selection for environmental variation: a statistical analysis and power calculations to detect response,
*Genetics*,**180**, 2209-2226. - Ros, M., Sorensen, D., Waagepetersen, R., Dupont-Nivet, M., SanCristobal, M., Bonnet, J-C. and Mallard, J. (2004) Evidence for genetic control of adult weight plasticity in the snail Helix aspersa,
*Genetics*,**168**, 2089-2097. - Sorensen, D. and Waagepetersen, R. (2003) Normal linear models with genetically structured residual variance heterogeneity: A case study,
*Genetical Research*,**82**, 207-222.

- Waagepetersen, R. (2006) A simulation-based goodness-of-fit test for random effects in generalized linear mixed models (revised 16/01/2006),
*Scandinavian Journal of Statistics*,**33**, 721-731. -
Christensen, O. F. and Waagepetersen, R. (2002) Bayesian
prediction of spatial count data using generalised linear mixed models,
*Biometrics*,**58**, 280-286. - Christensen, O. F, Møller, J. and Waagepetersen, R. (2001) Geometric
ergodicity of Metropolis-Hastings algorithms for conditional simulation
in generalised linear mixed models,
*Methodology and Computation in Applied Probability*,**3**, 309-327.

- Tøgersen, F. Aa. and Waagepetersen, R. (2004) Statistical modelling and deconvolution of yield meter data (post script)(pdf),
*Scandinavian Journal of Statistics*,**31**, 247-264. -
Møller, J. and Waagepetersen, R. (1999) Discussion
on the paper 'Bayesian analysis of agricultural field experiments'
by J. E. Besag and D. Higdon,
*J. Roy. Statist. Soc. B*,**61**, 735. -
Møller, J. and Waagepetersen, R. (1998) Markov
connected component fields,
*Advances of Applied Probability*,**30**, 1-35.

- Waagepetersen, R., Ibanez-Escriche, N. and Sorensen, D. (2008) A comparison of strategies for Markov chain Monte Carlo computation in quantitative genetics,
*Genetics, Selection, Evolution*,**40**, 161-176. -
Döge, G., Mecke, K., Møller, J., Stoyan, D. and Waagepetersen, R. (2004) Grand canonical simulations of hard-disk systems by simulated tempering,
*International Journal of Modern Physics C*,**15**, 1-19. -
Mase, S., Møller, J., Stoyan, D., Waagepetersen, R. and Döge,
G. (2001) Packing
densities and simulated tempering for hard core Gibbs point processes,
*Annals of the Institute of Statistical Mathematics*,**53**, 661-680. -
Waagepetersen, R. and Sorensen, Daniel (2001) A
tutorial on reversible jump MCMC with a view toward QTL-mapping,
*International Statistical Review*,**69**, 49-61.

- Rasmussen, J., Waagepetersen, R. and Rasmussen, K. P. (2017) A new
method for projection of anthropometric correlation for virtual
population modeling,
*International Journal of Human Factors Modelling and Simulation*, to appear. - Andersen, S., Waagepetersen, R. and Laurberg, Peter (2015) Misclassification of iodine intake level from morning spot urine samples with high iodine excretion among Inuit and non-Inuit in Greenland,
*British Journal of Nutrition*,**113**, 1433-1440. - Kurande, V. H., Bilgrau, A. E., Waagepetersen, R., Toft, E. and
Prasad, R. (2013) Interrater reliability of diagnostic methods in
traditional Indian Ayurvedic medicine,
*Evidence-based Complementary and Alternative Medicine*, Volume 2013, Article ID 658275, 12 pages. - Kurande, V. H., Waagepetersen, R., Toft, E. & Prasad, R. (2013) Reliability Studies of Diagnostic Methods in Indian Traditional Ayurveda Medicine - an Overview,
*Journal of Ayurveda and Integrative Medicine*,**4**, 67-76. - Rodrigo-Domingo, M., Waagepetersen, R., Bødker, J.S.,
Falgreen, S., Kjeldsen, M.K., Johnsen, H.E., Dybkær, K. and
Bøgsted, M. (2013) Reproducible probe-level analysis of the
Affymetrix Exon 1.0 ST array with R/Bioconductor,
*Briefings in Bioinformatics*,**15**, 519-533. - Kurande, V., Waagepetersen, R., Toft, E. and Prasad,
R. (2012) Reliability of pulse diagnosis in traditional Indian Ayurveda medicine,
*Global Advances in Health and Medicine*,**1**, 36-42. - Waagepetersen, R. (2010) A statistical modeling approach to build expert credit risk rating systems,
*Journal of Credit Risk*,**6**, 81-94. - Agerholm, N., Waagepetersen, R., Tradisauskas, N., Lahrmann, H. and Harms, L. (2008) Preliminary results from the intelligent speed adaptation project `Pay as you speed',
*Intelligent Transport Systems*,**2**, 143-153. - Bertelsen, M.G., Tustin, D.S. and Waagepetersen, R. (2002) Effects of GA3
and GA4+7 on early bud development of "Pacific Rose",
*Journal of Horticultural Science and Biotechnology*,**77**, 83-90.

- Møller, J. and Waagepetersen, R. (2003) An introduction to simulation-based inference for spatial point processes, in
*Spatial statistics and computational methods*, Møller, J. (editor), Lecture Notes in Statistics 173, Springer-Verlag. -
Møller, J. and Waagepetersen, R. (2002) Statistical inference for Cox processes, in
*Spatial cluster modelling*, Denison, D. and Lawson, A. B. (eds), Chapman and Hall/CRC.

- Khanmohammadi, M., Waagepetersen, R., Nava, N., Nyengaard, J. and Sporring, J. (2014) Analysing the distribution of synaptic vesicles using a spatial point process model,
*Proceedings of the 5th ACM Conference on Bioinformatics, Computational Biology, and Health Informatics*, Association for Computing Machinery, 73-78. - Kurande, V. H., Waagepetersen, R., Toft, E. and Prasad, R. (2013) Reliability of Pulse Diagnosis in Traditional Indian Ayurveda Medicine,
*Research in Complemetary Medicine/Forschende Komplementärmedizin: Research Practice Perspectives - Wissenschaft Praxis Perspektiven*,**20**(Suppl 1), 86-87. - Kurande, V. H.; Waagepetersen, R. and Toft, E. (2012) Repeatability of pulse diagnosis in traditional Indian Ayurveda medicine,
*BMC Complementary and Alternative Medicine*,**12**(Suppl 1), 188, P02.132. - Agerholm, N., Waagepetersen, R., Tradisauskas, N. and Lahrmann, H. (2008) Intelligent speed adaptation in company vehicles,
*Proceedings of the 2008 IEEE Intelligent Vehicles Symposium*, Eindhoven University of Technology, Eindhoven, June 4-6, 936-943. - Verification of a Probabilistic Model for A Distribution System with Integration of Dispersed Generation (2008) Chen, P., Chen, Z., Bak-Jensen, B., Waagepetersen, R., and Sørensen, S.,
*Proceedings of the 16th Power Systems Computation Conference*. Glasgow: University of Strathclyde, 7. - Waagepetersen, R. (2006) Estimating functions for inhomogeneous Cox processes,
*Proceedings of S4G, the 6th International conference on Stereology, Spatial Statistics and Stochastic Geometry*, Prague, Czech Republic, June 26-29, 2006, 149-158. - Waagepetersen, R., Ibanez, N. and Sorensen, D. (2006) Strategies for MCMC computation in quantitative genetics,
*Proceedings of the 8th World Congress on Genetics Applied to Livestock Production*, Belo Horizonte, Minas Gerais, Brazil, August 13-18, 2006. - Gianola, D., Sorensen, D. and Waagepetersen, R. (2003) Model choice in animal breeding: A case study of litter size in pigs. Joint Statistical Meetings of American Statistical Association, Institute of Mathematical Statistics, In: Abstract book, International Biometrics Society and Statistical Society of Canada. San Franciso, CA, USA, 31 July-7 August, 309.
- Benes, V., Bodlak, K., Møller, J. and Waagepetersen, R. (2003) Application of log Gaussian Cox processes in disease mapping,
*Proceedings of the ISI Conference on Environmental Statistics and Health*, Santiago de Compostela, eds J. Mateu, D. Holland, and W. Gonzales-Mantiega, 95-105. - Sorensen, D. and R. Waagepetersen (2002) Model selection for prediction of
breeding values,
*Proceedings of the 7th World Congress of Genetics Applied to Livestock Production*, Montpellier, France. Vol.**32**, 513-520 (invited paper). -
Møller, J., Syversveen, A.-R. and Waagepetersen, R. (1997) Log
Gaussian Cox processes: A statistical model for analyzing stand structural
heterogeneity,
*Proceedings of First European Conference for Information Technology in Agriculture*(editors Kure, H., Thysen, I., and Kristensen, A. R.), Department of Mathematics and Physics, The Royal Veterinary and Agricultural University, Denmark, 1997, 339-342.

- Waagepetersen, R. (2006) An introduction to statistics for spatial point processes, handouts for one day course at Aalborg University, June 10, 2006.
- Waagepetersen, R. (2003) Hand outs and exercises for DINA Workshop on Monte Carlo methods for hierarchical models, October 30-31 2003.
- Lundbye-Christensen, S. and Waagepetersen, R. (2002) Exercises for the DINA Research School workshop on Data series, state-space models, and the Kalman filter.
- Waagepetersen, R. (1998) A quick introduction to Markov chain Monte Carlo (revised October 2003). Internal Report 8, Biometry Research Unit, Danish Institute of Agricultural Sciences (lecture notes for the DINA Research School).

- Waagepetersen, R. and Guan, Y. (2008) Two-step estimation for inhomogeneous spatial point processes - a simulation study.
- Waagepetersen, R. (2007) A note on asymptotic results for estimating functions.
- Waagepetersen, R. (2005) Propriety of posteriors for Poisson processes.
- Benes, Viktor, Bodlak, K., Møller, J. and Waagepetersen, R. (2002) Spatial modelling of tick-borne encephalitis data. 24 pages.
- Christensen, O. F, Møller, J., and Waagepetersen, R. (2000) Analysis of spatial data using generalized linear mixed models and Langevin-type Markov chain Monte Carlo. R-002009, Department of Mathematics, Aalborg University. 25 pages.
- Waagepetersen, R. (1998) Kirsebær: et eksempel på anvendelse af generaliserede lineære modeller. Internal Report 9, Biometry Research Unit, Danish Institute of Agricultural Sciences.
- Waagepetersen, R. (1997) Contributions to the statistical modelling of image data and spatial point patterns. (Survey paper for Ph.D.-thesis). 56 pages.
- Waagepetersen, R. (1997) Analysis of residuals from segmentation of noisy images. Research Report 380, Dept. of Theoretical Statistics, University of Aarhus.
- Waagepetersen, R. (1997) Phase transition and simulation for a penalized Ising model with applications in Bayesian image analysis. Research Report 381, Dept. of Theoretical Statistics, University of Aarhus.
- Waagepetersen, R. (1994) Modelleringen af geologisk variabilitet i et grundvandshydraulisk perspektiv. Published in the DGU Data Documentation series. In danish. 54 pages.

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